Skip to main content

Table 1 PAS-Gen database description: type and sub-types of genes

From: Debutant iOS app and gene-disease complexities in clinical genomics and precision medicine

#

Gene types

Gene sub-types

1

Protein coding

Coding

2

processed_transcript

non_coding

4

lincRNA

non_coding

5

Antisense

non_coding

6

IG_C_gene

non_coding

7

bidirectional_promoter_lncRNA

non_coding

8

polymorphic_pseudogene

non_coding

9

transcribed_unitary_pseudogene

non_coding

10

transcribed_unprocessed_pseudogene

non_coding

11

transcribed_processed_pseudogene

non_coding

12

sense_overlapping

non_coding

13

scRNA

non_coding

14

non_coding

non_coding

15

unprocessed_pseudogene

non_coding

16

IG_V_gene

non_coding

17

unitary_pseudogene

non_coding

18

vaultRNA

non_coding

19

TR_C_gene

non_coding

20

sense_intronic

non_coding

21

snRNA

non_coding

22

processed_pseudogene

non_coding

23

TEC

non_coding

24

TR_V_pseudogene

non_coding

25

TR_V_gene

non_coding

26

macro_lncRNA

non_coding

  1. PAS-Gen database includes protein coding and 25 non-coding gene types (processed transcript, lincRNA, antisense, IG C gene, bidirectional promoter lncRNA, polymorphic pseudogene, transcribed unitary pseudogene, transcribed unprocessed pseudogene, transcribed processed pseudogene, sense overlapping, scRNA, non coding, unprocessed pseudogene, IG V gene, unitary pseudogene, vaultRNA, TR C gene, sense intronic, snRNA, processed pseudogene, TEC, TR V pseudogene, TR V gene, macro lncRNA)