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Table 10 Top 20 canonical pathways identified by ingenuity pathway analysis (IPA) in the affected twin of each family

From: Post-zygotic genomic changes in glutamate and dopamine pathway genes may explain discordance of monozygotic twins for schizophrenia

Canonical pathways—family 1 affected (1A)

Shared with

p value

1. CREB signaling in neurons

2A, 2U

0.0000041687

2. Neuropathic pain signaling in dorsal horn neurons

2A, 1U, 2U

0.0000083176

3. Axonal guidance signaling

2A, 1U

0.0000630957

4. Cellular effects of sildenafil (Viagra)

2A, 1U

0.0001479108

5. Role of NFAT in cardiac hypertrophy

–

0.0001513561

6. Dopamine-DARPP32 feedback in cAMP signaling

2A

0.0002290868

7. Synaptic long term depression

2A, 1U, 2U

0.0002398833

8. Wnt/Ca+ pathway

–

0.0003630781

9. Synaptic long term potentiation

2A, 2U

0.0008511380

10. PPARα/RXRα activation

2U

0.0011748976

11. Gap junction signaling

–

0.0013803843

12. Glutamate receptor signaling

2A

0.0014791084

13. 14-3-3-mediated signaling

–

0.0020417379

14. Netrin signaling

2A, 1U, 2U

0.0022908677

15. Leptin signaling in obesity

–

0.0024547089

16. Nitric oxide signaling in the cardiovascular system

2A, 1U

0.0024547089

17. Hepatic cholestasis

2U

0.0026915348

18. Uracil degradation II (reductive)

2U

0.0029512092

19. Thymine degradation

2U

0.0029512092

20. Melatonin signaling

1U

0.0033113112

Canonical pathways—family 2 affected (2A)

Shared with

p value

1. Sperm motility

1U

0.0000053703

2. Glutamate receptor signaling

1A

0.0000389045

3. Neuropathic pain signaling in dorsal horn neurons

1A, 2U, 1U

0.0000575440

4. Cellular effects of sildenafil (Viagra)

1A, 1U

0.0002238721

5. Nitric oxide signaling in the cardiovascular system

1A, 1U

0.0002884032

6. Synaptic long term depression

1A, 2U, 1U

0.0003235937

7. CREB signaling in neurons

1A, 2U

0.0003630781

8. Synaptic long term potentiation

1A, 2U

0.0005888437

9. Phospholipase C signaling

–

0.0008709636

10. Netrin signaling

1A, 2U, 1U

0.0010964782

11. G-Protein coupled receptor signaling

2U

0.0012589254

12. α-adrenergic signaling

–

0.0016595869

13. Protein kinase A signaling

2U, 1U

0.0023442288

14. nNOS signaling in neurons

–

0.0040738028

15. Huntington’s disease signaling

–

0.0042657952

16. Dopamine-DARPP32 feedback in cAMP signaling

1A

0.0058884366

17. Cardiac ÃŽ2-adrenergic signaling

2U

0.0067608298

18. Calcium signaling

2U

0.0077624712

19. Breast cancer regulation by Stathmin 1

–

0.0087096359

20. Axonal guidance signaling

1A, 1U

0.0089125094

  1. 1A Family 1—affected twin, 1U Family 1—unaffected twin, 2A Family 2—affected twin, 2U Family 2—unaffected twin