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Table 1 Sequence databases and repositories

From: Unveiling ncRNA regulatory axes in atherosclerosis progression

Sequence repository or database

Web page address

Genbank

-www.ncbi.nlm.nih.gov

DDBJ, DNA Databank of Japan

-www.ddbj.nig.ac.jp

ENA, European Nucleotide Archive

-www.ebi.ac.uk/ena

INSDC (and Sequence Read Archives)

-insdc.org

NCBI Reference Sequence Database (Refseq)

-www.ncbi.nlm.nih.gov/refseq/

Ensembl Genome Viewer

-www.ensembl.org

Genome Data Viewer

-www.ncbi.nlm.nih.gov/genome/gdv/

miRBase

-www.mirbase.org

LNCipedia Project (database of human ncRNAs)

-www.lncipedia.org

NONCODE (knowledge database of ncRNAs)

-www.noncode.org

RNA central (ncRNA sequence database)

-rnacentral.org

ENCODE (encyclopedia of DNA elements)

-www.encodeproject.org

FANTOM (functional annotation of the human genome

-fantom.gsc.riken.jp

  1. Shown are repositories, databases data viewers of nucleic acids. This is not an exhaustive list, and the selection only reflects authors’ preferences